STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNEG_01049RGS domain-containing protein. (351 aa)    
Predicted Functional Partners:
PNEG_00162
Uncharacterized protein.
    
 
 0.969
PNEG_02631
Uncharacterized protein.
      
 0.542
PNEG_01051
Uncharacterized protein.
 
      0.541
PNEG_02250
Uncharacterized protein.
      
 0.518
PNEG_00112
Uncharacterized protein.
    
 
 0.493
PNEG_02767
Uncharacterized protein.
      
 0.491
PNEG_00464
Abhydrolase_2 domain-containing protein.
 
      0.486
PNEG_01223
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.
 
      0.433
PNEG_00201
PH domain-containing protein.
      
 0.422
PNEG_01403
Uncharacterized protein.
      
 0.414
Your Current Organism:
Pneumocystis murina
NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123
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