STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNEG_02158SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family. (157 aa)    
Predicted Functional Partners:
PNEG_01088
Ubiquitin-like domain-containing protein.
    
 0.999
PNEG_02095
Ubiquitin-like protein pmt3/smt3.
   
 0.999
PNEG_00306
Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family.
   
 0.999
PNEG_03472
Uncharacterized protein.
    
 0.997
PNEG_00124
Uncharacterized protein.
    
 0.997
PNEG_01745
ThiF domain-containing protein.
  
 0.996
PNEG_02571
Uncharacterized protein.
    
 0.993
PNEG_00481
AAA_23 domain-containing protein.
    
 0.976
PNEG_02066
SP-RING-type domain-containing protein.
   
 0.970
PNEG_02924
Uncharacterized protein.
   
 
 0.956
Your Current Organism:
Pneumocystis murina
NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.