STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNEG_00710Uncharacterized protein. (1050 aa)    
Predicted Functional Partners:
SUS1
Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...]
    
 0.990
PNEG_01723
Uncharacterized protein.
    
 
 0.984
PNEG_02324
Uncharacterized protein.
  
 
 0.972
PNEG_00921
Uncharacterized protein.
    
 
 0.959
PNEG_02082
Uncharacterized protein.
    
 
 0.951
PNEG_00786
PCI domain-containing protein.
   
 
 0.935
PNEG_01602
Uncharacterized protein.
    
 
 0.916
PNEG_02271
Uncharacterized protein.
    
 
 0.902
PNEG_03208
RRM domain-containing protein.
   
 
 0.689
PNEG_00489
ATP-dependent RNA helicase uap56.
   
 
 0.677
Your Current Organism:
Pneumocystis murina
NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.