STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNEG_00322Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (104 aa)    
Predicted Functional Partners:
PNEG_01300
E3 ubiquitin-protein ligase RBX1.
   
 0.999
PNEG_01440
NEDD8 protein.
   
 0.963
PNEG_02870
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.954
PNEG_01613
MPN domain-containing protein.
   
 0.952
PNEG_04289
PCI domain-containing protein.
    
  0.934
PNEG_02371
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.923
PNEG_01818
JAB_MPN domain-containing protein.
   
 0.905
PNEG_04253
E3 ubiquitin ligase complex SCF subunit scon-3; Belongs to the SKP1 family.
   
 
 0.893
PNEG_00799
JmjC domain-containing protein.
    
 0.865
PNEG_01087
UBX domain-containing protein.
    
 0.859
Your Current Organism:
Pneumocystis murina
NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.