STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNEG_00347Uncharacterized protein. (146 aa)    
Predicted Functional Partners:
PNEG_01295
Ribosomal protein L13.
   
 
 0.998
PNEG_00214
MRP-L46 domain-containing protein.
   
 
 0.990
PNEG_02149
Ribosomal protein L32.
   
 
 0.986
PNEG_03211
Ribosomal protein S16.
   
 
 0.985
PNEG_01503
Ribosomal protein L19.
   
 
 0.985
PNEG_01022
Uncharacterized protein.
   
 
 0.984
PNEG_02715
Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
   
 0.984
PNEG_00546
Ribosomal protein L30.
   
 
 0.981
PNEG_01169
Uncharacterized protein.
   
 
 0.981
PNEG_01959
Uncharacterized protein.
   
 
 0.979
Your Current Organism:
Pneumocystis murina
NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.