STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNEG_00177Letm1 RBD domain-containing protein. (485 aa)    
Predicted Functional Partners:
PNEG_00146
PX domain-containing protein.
 
    
 0.844
PNEG_01355
KOW domain-containing protein.
 
  
   0.765
PNEG_02291
Uncharacterized protein.
    
 0.660
PNEG_01785
Cell division control protein 42.
    
 0.660
PNEG_00178
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
 
      0.641
PNEG_01418
GTP-binding protein rhoA.
    
 0.615
PNEG_00853
GTP-binding protein rho3.
    
 0.615
PNEG_00760
GTP-binding protein rho4.
    
 0.615
PNEG_01817
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.607
PNEG_00814
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.604
Your Current Organism:
Pneumocystis murina
NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123
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