STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNEG_01523ULP_PROTEASE domain-containing protein. (829 aa)    
Predicted Functional Partners:
PNEG_02095
Ubiquitin-like protein pmt3/smt3.
    
 0.993
PNEG_00324
ULP_PROTEASE domain-containing protein.
    
0.954
PNEG_02158
SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.943
PNEG_03566
Csm1 domain-containing protein.
   
 
 0.910
PNEG_00306
Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family.
    
 
 0.831
PNEG_01638
Importin subunit alpha; Belongs to the importin alpha family.
    
 
 0.796
PNEG_01607
Uncharacterized protein.
   
 0.783
PNEG_01455
Ipi1_N domain-containing protein.
    
 0.782
PNEG_02398
Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
     
 0.770
PNEG_03177
Elongation factor 3.
   
   0.749
Your Current Organism:
Pneumocystis murina
NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.