STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNEG_01484Uncharacterized protein. (411 aa)    
Predicted Functional Partners:
PNEG_01981
TFIIIC_sub6 domain-containing protein.
    
 0.999
PNEG_03302
Uncharacterized protein.
   
 0.999
PNEG_01625
B-block_TFIIIC domain-containing protein.
    
 0.998
PNEG_00732
Uncharacterized protein.
    
 0.996
PNEG_03554
Uncharacterized protein.
    
 0.982
PNEG_02353
Uncharacterized protein.
     
 0.916
PNEG_00712
SANT domain-containing protein.
    
 0.897
PNEG_00724
TATA-box-binding protein.
    
 0.834
PNEG_01934
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.808
PNEG_03316
Uncharacterized protein.
    
 0.788
Your Current Organism:
Pneumocystis murina
NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123
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