STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNEG_01138Uncharacterized protein. (293 aa)    
Predicted Functional Partners:
PNEG_01294
Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.
   
 
 0.954
PNEG_02083
Uncharacterized protein.
    
 
 0.940
PNEG_03489
GOLD domain-containing protein.
   
 0.890
PNEG_02501
GOLD domain-containing protein.
   
 0.876
PNEG_01853
GOLD domain-containing protein.
   
 0.862
PNEG_01928
ER lumen protein-retaining receptor.
   
 0.843
PNEG_02040
Pyr_redox_2 domain-containing protein.
    
 0.843
PNEG_02863
Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase.
    
  0.838
PNEG_03390
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
  0.832
PNEG_01876
Glyceraldehyde-3-phosphate dehydrogenase.
    
  0.809
Your Current Organism:
Pneumocystis murina
NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123
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