STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNEG_01577Uncharacterized protein. (317 aa)    
Predicted Functional Partners:
PNEG_00785
Uncharacterized protein.
   
 
 0.902
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.895
PNEG_01338
WD_REPEATS_REGION domain-containing protein.
   
 
 0.880
PNEG_00073
RNA helicase.
   
 
 0.879
PNEG_02788
Uncharacterized protein.
   
 
 0.873
PNEG_00525
Uncharacterized protein.
   
 
 0.873
PNEG_02878
RING-type domain-containing protein.
    
   0.870
PNEG_02124
CP-type G domain-containing protein.
   
 
 0.866
PNEG_00137
WD_REPEATS_REGION domain-containing protein.
   
  
 0.847
PNEG_02253
Uncharacterized protein.
   
   0.844
Your Current Organism:
Pneumocystis murina
NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123
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