STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNEG_01126EF1_GNE domain-containing protein; Belongs to the EF-1-beta/EF-1-delta family. (199 aa)    
Predicted Functional Partners:
PNEG_03579
40S ribosomal protein S17.
  
   0.999
PNEG_03248
40S ribosomal protein S20.
   
 
 0.999
PNEG_02384
Valine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.999
PNEG_02261
40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
   
 
 0.999
PNEG_02107
Uncharacterized protein.
  
 
 0.999
PNEG_00812
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
 
 0.999
PNEG_01883
Guanine nucleotide-binding protein subunit beta-like protein.
   
 
 0.999
PNEG_01907
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 
 0.999
PNEG_00457
Uncharacterized protein.
   
   0.999
PNEG_00106
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.999
Your Current Organism:
Pneumocystis murina
NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123
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