STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNEG_00654TRUD domain-containing protein. (574 aa)    
Predicted Functional Partners:
PNEG_01042
Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
   
 
 0.989
PNEG_01868
RNA methyltransferase, TrmH family, group 3.
   
 
 0.915
PNEG_02038
Ribosomal protein L15.
   
   0.901
PNEG_03205
Mitochondrial GTPase 1; Mitochondrial GTPase involved in assembly of the large ribosomal subunit. Plays a role in expression of the mitochondrial translational machinery; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
   
   0.898
PNEG_01295
Ribosomal protein L13.
   
   0.898
PNEG_01644
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
  
   0.894
PNEG_02520
tRNA modification GTPase TrmE; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
   
   0.887
PNEG_01584
L51_S25_CI-B8 domain-containing protein.
   
   0.886
PNEG_02731
Ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
   
   0.886
PNEG_00734
Ribosomal protein L24.
    
   0.883
Your Current Organism:
Pneumocystis murina
NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.