STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNEG_00793Uncharacterized protein. (311 aa)    
Predicted Functional Partners:
PNEG_03301
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
 
 
 0.993
PNEG_01390
Uncharacterized protein.
   
 
 0.982
PNEG_03110
Serine/threonine-protein phosphatase.
 
 
 0.944
PNEG_00792
FCP1 homology domain-containing protein.
 
    
 0.900
PNEG_03075
Uncharacterized protein.
    
 0.890
PNEG_02540
Small nuclear ribonucleoprotein Sm D2.
    
 0.875
PNEG_02210
Uncharacterized protein.
   
 0.870
PNEG_01987
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.859
PNEG_02497
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
    
 0.856
PNEG_00430
Small nuclear ribonucleoprotein G.
    
 0.852
Your Current Organism:
Pneumocystis murina
NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.