STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNEG_00255H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (175 aa)    
Predicted Functional Partners:
PNEG_03145
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
  
 0.999
PNEG_02895
Centromere/microtubule-binding protein CBF5.
   
 0.998
PNEG_01774
H/ACA ribonucleoprotein complex subunit 3.
   
 0.997
PNEG_01616
tRNA pseudouridine(55) synthase.
   
 0.983
PNEG_03364
rRNA 2'-O-methyltransferase fibrillarin.
   
 
 0.982
PNEG_00044
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
  
 0.967
PNEG_03357
Ribosomal_L7Ae domain-containing protein.
  
 0.947
PNEG_01186
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
  
 0.947
PNEG_01361
Nop domain-containing protein.
  
 
 0.946
PNEG_02293
CS domain-containing protein.
   
 
 0.941
Your Current Organism:
Pneumocystis murina
NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.