STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNEG_03615NOT2_3_5 domain-containing protein. (513 aa)    
Predicted Functional Partners:
PNEG_00720
Uncharacterized protein.
   
 0.998
PNEG_01829
Uncharacterized protein.
    
0.991
PNEG_03032
Uncharacterized protein.
   
 0.991
PNEG_02529
Cell differentiation protein rcd1.
    
 0.990
PNEG_03292
Endo/exonuclease/phosphatase domain-containing protein.
    
 0.985
PNEG_02072
Uncharacterized protein.
    
 0.972
PNEG_03276
ATP-dependent RNA helicase dhh1; Belongs to the DEAD box helicase family.
   
 0.930
PNEG_01554
Ubiquitin-conjugating enzyme E2-18 kDa; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.864
PNEG_00321
Uncharacterized protein.
    
 
 0.841
PNEG_01753
Uncharacterized protein.
    
 
 0.818
Your Current Organism:
Pneumocystis murina
NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.