STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNEG_03587SH3 domain-containing protein. (1006 aa)    
Predicted Functional Partners:
PNEG_03558
Uncharacterized protein.
    
 0.999
PNEG_00225
Peptidyl-prolyl cis-trans isomerase.
  
 0.999
PNEG_01442
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.906
PNEG_02103
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.850
PNEG_01438
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.848
PNEG_00888
Uncharacterized protein.
   
 0.848
PNEG_02410
Uncharacterized protein.
    
 0.839
PNEG_01991
Nuclear pore protein.
   
 0.838
PNEG_01520
SKIP_SNW domain-containing protein.
    
 0.837
PNEG_02844
Uncharacterized protein.
   
 0.834
Your Current Organism:
Pneumocystis murina
NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123
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