STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNEG_03427Uncharacterized protein. (522 aa)    
Predicted Functional Partners:
PNEG_01638
Importin subunit alpha; Belongs to the importin alpha family.
    
 0.900
PNEG_01144
Uncharacterized protein.
    
 0.885
PNEG_02934
Uncharacterized protein.
    
 0.872
PNEG_00313
HTH APSES-type domain-containing protein.
   
 0.868
PNEG_02182
B30.2/SPRY domain-containing protein.
    
 0.832
PNEG_01541
UBA domain-containing protein.
    
 0.832
PNEG_00870
WD_REPEATS_REGION domain-containing protein.
    
 0.831
PNEG_01438
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.805
PNEG_02592
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 0.799
PNEG_02650
Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation.
   
 0.798
Your Current Organism:
Pneumocystis murina
NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123
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