STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNEG_03148Uncharacterized protein. (367 aa)    
Predicted Functional Partners:
PNEG_03100
Uncharacterized protein.
   
  
 0.968
PNEG_01572
Guanine nucleotide-binding protein subunit beta.
   
 
 0.955
PNEG_03013
Uncharacterized protein.
    
 
 0.948
PNEG_03151
Uncharacterized protein.
   
 0.866
PNEG_00015
Guanine nucleotide-binding protein subunit alpha.
   
 0.866
PNEG_02767
Uncharacterized protein.
   
 
 0.843
PNEG_01943
Uncharacterized protein.
   
 0.835
PNEG_00486
SAGA-associated factor 11; Functions as component of the transcription regulatory histone acetylation (HAT) complex SAGA. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. SAGA acetylates nucleosomal histone H3 to some extent (to form H3K9ac, H3K14ac, H3K18ac and H3K23ac). SAGA interacts with DNA [...]
    
 0.825
PNEG_02303
Cep57_MT_bd domain-containing protein.
    
 0.825
PNEG_02719
G protein gamma domain-containing protein.
   
 
 0.818
Your Current Organism:
Pneumocystis murina
NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123
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