STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNEG_03056Uncharacterized protein. (453 aa)    
Predicted Functional Partners:
PNEG_00746
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43.
    
 0.976
PNEG_02208
RNA helicase.
    
 0.957
PNEG_02386
Uncharacterized protein.
    
 0.956
PNEG_00073
RNA helicase.
    
 0.955
PNEG_03274
U3 small nucleolar RNA-associated protein 22.
   
 
 0.942
PNEG_01071
G-patch domain-containing protein.
    
 
 0.941
PNEG_02183
Uncharacterized protein.
    
 
 0.939
PNEG_02766
Uncharacterized protein.
    
 
 0.938
PNEG_00822
S4 RNA-binding domain-containing protein.
    
 
 0.936
PNEG_00131
Uncharacterized protein.
    
   0.936
Your Current Organism:
Pneumocystis murina
NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.