STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNEG_02393Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (346 aa)    
Predicted Functional Partners:
PNEG_02022
Leucine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
      0.742
PNEG_02702
60S ribosomal protein L3-B; Belongs to the universal ribosomal protein uL3 family.
 
   
  0.701
PNEG_00905
Fe-S_biosyn domain-containing protein.
      
 0.619
PNEG_03100
Uncharacterized protein.
     
 0.584
PNEG_01178
Thioredoxin.
   
    0.563
PNEG_00811
Uncharacterized protein.
     
 0.520
PNEG_00838
WD_REPEATS_REGION domain-containing protein.
 
      0.515
UNG1
Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
 
      0.503
PNEG_00014
Fe-S_biosyn domain-containing protein.
   
  
 0.420
PNEG_03267
Uncharacterized protein.
      
 0.414
Your Current Organism:
Pneumocystis murina
NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123
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