STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNEG_01699Polyubiquitin. (153 aa)    
Predicted Functional Partners:
PNEG_02945
UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family.
   
 0.999
PNEG_00799
JmjC domain-containing protein.
    
 0.999
PNEG_03270
Ubiquitin-conjugating enzyme E2-16 kDa; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.998
PNEG_02642
3'-5' exonuclease domain-containing protein.
    
 0.998
PNEG_02326
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.998
PNEG_02571
Uncharacterized protein.
    
 0.996
PNEG_03177
Elongation factor 3.
    
 
 0.994
PNEG_01447
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.994
PNEG_02018
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.994
PNEG_01916
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.994
Your Current Organism:
Pneumocystis murina
NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.