STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNEG_01336RRM domain-containing protein. (243 aa)    
Predicted Functional Partners:
PNEG_02618
Uncharacterized protein.
    
 0.997
PNEG_00650
Uncharacterized protein.
   
 0.997
PNEG_01033
Smg4_UPF3 domain-containing protein.
    
 0.994
PNEG_01481
ATP-dependent RNA helicase fal1; Belongs to the DEAD box helicase family.
   
 0.992
PNEG_00211
Pinin_SDK_memA domain-containing protein.
   
 0.992
PNEG_03068
RRM domain-containing protein.
   
 0.986
PNEG_00179
PWI domain-containing protein.
   
 0.980
PNEG_00065
Uncharacterized protein.
    
 0.972
PNEG_01903
SAP domain-containing protein.
   
 0.948
PNEG_02158
SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.
   
 
 0.946
Your Current Organism:
Pneumocystis murina
NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.