PNEG_01031 protein (Pneumocystis murina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PNEG_01031

Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (356 aa)

Predicted Functional Partners:

PNEG_02898

0.990

PNEG_02881

0.864

PNEG_02543

0.837

PNEG_02542

0.837

PNEG_02134

0.825

PNEG_03182

0.823

PNEG_00838

0.779

PNEG_01602

0.778

PNEG_01723

0.778

PNEG_03414

0.750

Your Current Organism:

Pneumocystis murina

NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PNEG_00838	PNEG_01031	M7NTT9	M7PAK8	WD_REPEATS_REGION domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.779
PNEG_00838	PNEG_02542	M7NTT9	M7NQ21	WD_REPEATS_REGION domain-containing protein.	Rho-GAP domain-containing protein.	0.664
PNEG_00838	PNEG_02543	M7NTT9	M7NPM6	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.664
PNEG_00838	PNEG_02881	M7NTT9	M7NJB0	WD_REPEATS_REGION domain-containing protein.	AMPKBI domain-containing protein.	0.791
PNEG_00838	PNEG_03182	M7NTT9	M7NMA7	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.655
PNEG_01031	PNEG_00838	M7PAK8	M7NTT9	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	WD_REPEATS_REGION domain-containing protein.	0.779
PNEG_01031	PNEG_01602	M7PAK8	M7NNT0	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.778
PNEG_01031	PNEG_01723	M7PAK8	M7P7W6	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.778
PNEG_01031	PNEG_02134	M7PAK8	M7PGG7	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	HMG-box protein STE11.	0.825
PNEG_01031	PNEG_02542	M7PAK8	M7NQ21	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Rho-GAP domain-containing protein.	0.837
PNEG_01031	PNEG_02543	M7PAK8	M7NPM6	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.837
PNEG_01031	PNEG_02881	M7PAK8	M7NJB0	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	AMPKBI domain-containing protein.	0.864
PNEG_01031	PNEG_02898	M7PAK8	M7NNM1	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	RRM domain-containing protein.	0.990
PNEG_01031	PNEG_03182	M7PAK8	M7NMA7	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.823
PNEG_01031	PNEG_03414	M7PAK8	M7NM24	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	0.750
PNEG_01602	PNEG_01031	M7NNT0	M7PAK8	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.778
PNEG_01723	PNEG_01031	M7P7W6	M7PAK8	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.778
PNEG_02134	PNEG_01031	M7PGG7	M7PAK8	HMG-box protein STE11.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.825
PNEG_02134	PNEG_02898	M7PGG7	M7NNM1	HMG-box protein STE11.	RRM domain-containing protein.	0.954
PNEG_02542	PNEG_00838	M7NQ21	M7NTT9	Rho-GAP domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.664