STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNEG_03456CBFD_NFYB_HMF domain-containing protein. (189 aa)    
Predicted Functional Partners:
PNEG_02967
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
   
 0.999
PNEG_02642
3'-5' exonuclease domain-containing protein.
    
 0.999
PNEG_00958
DNA_pol_E_B domain-containing protein.
    
 0.998
PNEG_00317
CBFD_NFYB_HMF domain-containing protein.
    
 0.981
PNEG_01003
CBFD_NFYB_HMF domain-containing protein.
    
 0.965
PNEG_01772
Uncharacterized protein.
    
 
 0.948
PNEG_01885
Uncharacterized protein.
    
 0.947
PNEG_02201
DNA polymerase.
   
 0.927
PNEG_01633
DNA polymerase.
   
 0.924
PNEG_02177
Negative cofactor 2 complex subunit beta.
   
 
 0.919
Your Current Organism:
Pneumocystis murina
NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.