PNEG_00169 protein (Pneumocystis murina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PNEG_00169

Uncharacterized protein. (79 aa)

Predicted Functional Partners:

PNEG_00114

0.998

PNEG_03581

0.997

PNEG_03457

0.995

PNEG_01066

0.986

PNEG_04339

0.939

PNEG_01125

0.936

PNEG_01222

0.913

PNEG_03211

0.588

GET1

0.532

PNEG_00709

0.514

Your Current Organism:

Pneumocystis murina

NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GET1	PNEG_00114	M7P7Q6	M7NWY7	Protein GET1; Required for the post-translational delivery of tail-anchored (TA) proteins to the endoplasmic reticulum. Acts as a membrane receptor for soluble GET3, which recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol.	ER membrane protein complex subunit 3; The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER). Belongs to the EMC3 family.	0.535
GET1	PNEG_00169	M7P7Q6	M7PCV9	Protein GET1; Required for the post-translational delivery of tail-anchored (TA) proteins to the endoplasmic reticulum. Acts as a membrane receptor for soluble GET3, which recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol.	Uncharacterized protein.	0.532
GET1	PNEG_00709	M7P7Q6	M7NUX9	Protein GET1; Required for the post-translational delivery of tail-anchored (TA) proteins to the endoplasmic reticulum. Acts as a membrane receptor for soluble GET3, which recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol.	Preprotein translocase, SecY subunit.	0.566
PNEG_00114	GET1	M7NWY7	M7P7Q6	ER membrane protein complex subunit 3; The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER). Belongs to the EMC3 family.	Protein GET1; Required for the post-translational delivery of tail-anchored (TA) proteins to the endoplasmic reticulum. Acts as a membrane receptor for soluble GET3, which recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol.	0.535
PNEG_00114	PNEG_00169	M7NWY7	M7PCV9	ER membrane protein complex subunit 3; The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER). Belongs to the EMC3 family.	Uncharacterized protein.	0.998
PNEG_00114	PNEG_00709	M7NWY7	M7NUX9	ER membrane protein complex subunit 3; The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER). Belongs to the EMC3 family.	Preprotein translocase, SecY subunit.	0.525
PNEG_00114	PNEG_01066	M7NWY7	M7PAN5	ER membrane protein complex subunit 3; The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER). Belongs to the EMC3 family.	TPR_REGION domain-containing protein.	0.989
PNEG_00114	PNEG_01125	M7NWY7	M7P983	ER membrane protein complex subunit 3; The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER). Belongs to the EMC3 family.	Uncharacterized protein.	0.928
PNEG_00114	PNEG_01222	M7NWY7	M7NTS3	ER membrane protein complex subunit 3; The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER). Belongs to the EMC3 family.	Uncharacterized protein.	0.926
PNEG_00114	PNEG_03457	M7NWY7	M7P2A7	ER membrane protein complex subunit 3; The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER). Belongs to the EMC3 family.	EMC1_C domain-containing protein.	0.998
PNEG_00114	PNEG_03581	M7NWY7	M7PCE5	ER membrane protein complex subunit 3; The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER). Belongs to the EMC3 family.	ER membrane protein complex subunit 4; Belongs to the EMC4 family.	0.999
PNEG_00114	PNEG_04339	M7NWY7	A0A0W4ZWV1	ER membrane protein complex subunit 3; The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER). Belongs to the EMC3 family.	DUF2012 domain-containing protein.	0.960
PNEG_00169	GET1	M7PCV9	M7P7Q6	Uncharacterized protein.	Protein GET1; Required for the post-translational delivery of tail-anchored (TA) proteins to the endoplasmic reticulum. Acts as a membrane receptor for soluble GET3, which recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol.	0.532
PNEG_00169	PNEG_00114	M7PCV9	M7NWY7	Uncharacterized protein.	ER membrane protein complex subunit 3; The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER). Belongs to the EMC3 family.	0.998
PNEG_00169	PNEG_00709	M7PCV9	M7NUX9	Uncharacterized protein.	Preprotein translocase, SecY subunit.	0.514
PNEG_00169	PNEG_01066	M7PCV9	M7PAN5	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.986
PNEG_00169	PNEG_01125	M7PCV9	M7P983	Uncharacterized protein.	Uncharacterized protein.	0.936
PNEG_00169	PNEG_01222	M7PCV9	M7NTS3	Uncharacterized protein.	Uncharacterized protein.	0.913
PNEG_00169	PNEG_03211	M7PCV9	M7NML9	Uncharacterized protein.	Ribosomal protein S16.	0.588
PNEG_00169	PNEG_03457	M7PCV9	M7P2A7	Uncharacterized protein.	EMC1_C domain-containing protein.	0.995