STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNEG_01601Uncharacterized protein. (841 aa)    
Predicted Functional Partners:
PNEG_02980
Ubiquitin-40S ribosomal protein S27a.
    
 
 0.865
PNEG_04281
MIF4G domain-containing protein.
   
   0.728
PNEG_01751
Uncharacterized protein.
   
   0.728
PNEG_01610
Ribonucleoside-diphosphate reductase small chain.
     
 0.579
PNEG_00281
WD_REPEATS_REGION domain-containing protein.
    
 
 0.571
PNEG_00616
Uncharacterized protein.
    
   0.559
PNEG_00053
Ubiquitin-60S ribosomal protein L40.
    
   0.559
PNEG_01906
Ubiquitin-60S ribosomal protein L40.
    
   0.559
PNEG_02558
HECT domain-containing protein.
   
  
 0.558
PNEG_00597
Uncharacterized protein.
   
  
 0.554
Your Current Organism:
Pneumocystis murina
NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.