STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNEG_01247Uncharacterized protein. (1851 aa)    
Predicted Functional Partners:
PNEG_00724
TATA-box-binding protein.
    
 
 0.995
PNEG_02775
CBFD_NFYB_HMF domain-containing protein.
    
 
 0.954
PNEG_02177
Negative cofactor 2 complex subunit beta.
    
 
 0.906
PNEG_02781
Uncharacterized protein.
 
      0.868
PNEG_00424
Peptidase_M1 domain-containing protein.
   
  
 0.672
PNEG_02420
Uncharacterized protein.
    
 
 0.654
PNEG_01885
Uncharacterized protein.
  
 
0.649
PNEG_00989
Transcription initiation factor IIB.
    
 
 0.623
PNEG_01780
Uncharacterized protein.
   
 
 0.623
PNEG_03177
Elongation factor 3.
   
 
 0.616
Your Current Organism:
Pneumocystis murina
NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.