STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNEG_00413Vps8 domain-containing protein. (1582 aa)    
Predicted Functional Partners:
PNEG_01594
Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.
    
 
 0.985
PNEG_00716
Pep3_Vps18 domain-containing protein.
    
 
 0.985
PNEG_00745
E3 ubiquitin-protein ligase PEP5.
    
 
 0.985
PNEG_00388
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.980
PNEG_03368
CNH domain-containing protein.
   
 
 0.941
PNEG_03094
GTP-binding protein ypt5.
    
 
 0.931
PNEG_01315
CNH domain-containing protein.
   
 
 0.931
PNEG_02601
PIG-P domain-containing protein.
 
      0.876
PNEG_02259
Uncharacterized protein.
   
 
 0.707
PNEG_02836
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
   
 
 0.594
Your Current Organism:
Pneumocystis murina
NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.