STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNEG_00191CID domain-containing protein. (174 aa)    
Predicted Functional Partners:
PNEG_00527
Uncharacterized protein; Belongs to the cyclin family.
   
 
 0.997
PNEG_01513
Protein kinase domain-containing protein.
    
 
 0.995
PNEG_03350
Uncharacterized protein; Belongs to the cyclin family.
   
 
 0.872
PNEG_00621
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 
 0.864
PNEG_00396
Uncharacterized protein.
    
 
 0.840
PNEG_01421
MHYT domain-containing protein.
    
 
 0.835
PNEG_00538
Cyclin N-terminal domain-containing protein.
   
 
 0.700
PNEG_00597
Uncharacterized protein.
   
 
 0.628
PNEG_02314
Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
      
 0.619
PNEG_02650
Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation.
    
 
 0.588
Your Current Organism:
Pneumocystis murina
NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.