STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yrbEToluene transporter subunit, membrane component; Evidence 2b:Function of strongly homologous gene; Product type t:transporter. (263 aa)    
Predicted Functional Partners:
yrbF
RlpA-like protein precursor (fragment); Evidence 2b:Function of strongly homologous gene; Product type lp:lipoprotein.
 0.999
yrbD
Putative toluene transporter subunit; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type t:transporter.
 0.999
yrbC
Toluene tolerance protein; Evidence 2b:Function of strongly homologous gene; Product type t:transporter.
 
 
 0.951
CCD28714.1
Sulfate transporter/antisigma-factor antagonist STAS; Evidence 2b:Function of strongly homologous gene; Product type t:transporter.
  
 0.918
CCD28712.1
Lipoprotein vacJ precursor; Evidence 2a:Function of homologous gene experimentally demonstrated in an other organism; Product type lp:lipoprotein.
 
   
 0.908
CCD28715.1
ABC transporter, ATP-binding protein; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type t:transporter.
    
 0.871
potG
Putrescine transport ATP-binding protein potG; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
   
  0.756
CCD28716.1
ABC transporter, permease component; Evidence 2b:Function of strongly homologous gene; Product type t:transporter.
    
  0.755
macB
Macrolide export ATP-binding/permease protein macB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
    
 0.682
CCD29014.1
ABC transporter ATP-binding protein; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type t:transporter.
   
   0.606
Your Current Organism:
Glomeribacter gigasporarum
NCBI taxonomy Id: 1070319
Other names: C. Glomeribacter gigasporarum BEG34, Candidatus Glomeribacter gigasporarum BEG34, Candidatus Glomeribacter gigasporarum str. BEG34, Candidatus Glomeribacter gigasporarum strain BEG34
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