STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCD28792.1Putative Type II secretion system protein; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt:putative transporter. (355 aa)    
Predicted Functional Partners:
CCD28788.1
Type IVB pilus formation outer membrane protein,R64 PilN family; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type ps:putative structure.
 
    0.949
PilQ
Type IV pilus biosynthesis protein PilQ; Evidence 2b:Function of strongly homologous gene; Product type s:structure.
 
   0.930
pilN
Putative type IV pilus protein PilL (fragment); Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pf:putative factor.
  
    0.786
CCD28930.1
Type IVB pilus formation outer membrane protein,PilN family; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type s:structure; Belongs to the bacterial secretin family.
  
    0.782
CCD28787.1
Putative type IV pilus protein PilL (fragment); Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type ps:putative structure.
       0.773
CCD28789.1
Putative type IV pilus protein PilO; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type ps:putative structure.
       0.773
PilP
Type IV pilus biogenesis protein PilP; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type e:enzyme.
       0.773
pilQ
Type IV pilus biosynthesis protein PilQ; Evidence 2b:Function of strongly homologous gene; Product type s:structure.
  
   0.707
ComA
DNA internalization-related competence protein ComA; Evidence 2a:Function of homologous gene experimentally demonstrated in an other organism; Product type cp:cell process.
   
  
 0.677
CCD29718.1
Lytic transglycosylase, Invasion protein (pilT homolog); Evidence 2b:Function of strongly homologous gene; Product type e:enzyme.
  
     0.629
Your Current Organism:
Glomeribacter gigasporarum
NCBI taxonomy Id: 1070319
Other names: C. Glomeribacter gigasporarum BEG34, Candidatus Glomeribacter gigasporarum BEG34, Candidatus Glomeribacter gigasporarum str. BEG34, Candidatus Glomeribacter gigasporarum strain BEG34
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.