STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCD28818.1Permease of the major facilitator superfamily; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type t:transporter. (400 aa)    
Predicted Functional Partners:
CCD28820.1
Putative non-ribosomal peptide synthase; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pcp:putative cell process.
 
 
 0.941
CCD28819.1
Putative Non-ribosomal peptide synthase,PvdD/PvdJ-like; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe:putative enzyme.
 
 
 0.882
G2J7S2_9BURK
Fragment of IS66 family transposase; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe:putative enzyme.
       0.773
CCD30230.1
Putative Histidine kinase; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe:putative enzyme.
  
  
 0.622
CCD30067.1
Sensor protein; Evidence 2b:Function of strongly homologous gene; Product type e:enzyme.
  
  
 0.618
CCD28822.1
Hypothetical protein; Evidence 5:No homology to any previously reported sequences.
    
  0.445
CCD30218.1
Putative Histidine kinase, sensor protein (fragment); Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe:putative enzyme.
      
 0.407
Your Current Organism:
Glomeribacter gigasporarum
NCBI taxonomy Id: 1070319
Other names: C. Glomeribacter gigasporarum BEG34, Candidatus Glomeribacter gigasporarum BEG34, Candidatus Glomeribacter gigasporarum str. BEG34, Candidatus Glomeribacter gigasporarum strain BEG34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.