STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCD28932.1Putative type IV pilus assembly protein; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type ps:putative structure. (168 aa)    
Predicted Functional Partners:
CCD28933.1
Putative Type II secretion system protein E; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt:putative transporter.
       0.668
pulF
Type II secretory pathway, component PulF; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type s:structure.
       0.668
CCD28935.1
Putative Tou1 (fragment); Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe:putative enzyme.
       0.663
CCD28931.1
Putative PilO-like pilus assembly protein; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type ps:putative structure.
       0.623
traK
Fragment of putative antirepressor protein; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr:putative regulator.
       0.610
CCD28929.1
Putative PilL domain protein; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type ps:putative structure.
       0.610
CCD28930.1
Type IVB pilus formation outer membrane protein,PilN family; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type s:structure; Belongs to the bacterial secretin family.
       0.610
Your Current Organism:
Glomeribacter gigasporarum
NCBI taxonomy Id: 1070319
Other names: C. Glomeribacter gigasporarum BEG34, Candidatus Glomeribacter gigasporarum BEG34, Candidatus Glomeribacter gigasporarum str. BEG34, Candidatus Glomeribacter gigasporarum strain BEG34
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.