STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
damD12 class N6 adenine-specific DNA methyltransferase; Evidence 2b:Function of strongly homologous gene; Product type e:enzyme. (259 aa)    
Predicted Functional Partners:
CCD30310.1
Putative DNA methyltransferase; Evidence 2b:Function of strongly homologous gene; Product type e:enzyme.
  
  
  0.700
CCD28941.1
Hypothetical protein; Evidence 5:No homology to any previously reported sequences.
       0.588
traM
TraM-like protein similar to IcmL/DotI genes; Evidence 2a:Function of homologous gene experimentally demonstrated in an other organism; Product type pm:putative membrane component.
       0.584
TraN
TraN-like protein similar to IcmK; Evidence 2b:Function of strongly homologous gene; Product type pm:putative membrane component.
       0.584
traO
TraO conjugal transfer like protein; Evidence 2b:Function of strongly homologous gene; Product type ps:putative structure.
       0.584
CCD28939.1
Putative PilV-like protein; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pf:putative factor.
       0.532
dam-2
D12 class N6 adenine-specific DNA methyltransferase; Evidence 2b:Function of strongly homologous gene; Product type e:enzyme.
  
  
 
0.455
CCD28945.1
Hypothetical protein; Evidence 5:No homology to any previously reported sequences.
       0.418
CCD28946.1
Conserved hypothetical protein; Evidence 4:Homologs of previously reported genes of unknown function.
       0.418
CCD28938.1
Putative type II secretion system protein E; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pf:putative factor.
       0.413
Your Current Organism:
Glomeribacter gigasporarum
NCBI taxonomy Id: 1070319
Other names: C. Glomeribacter gigasporarum BEG34, Candidatus Glomeribacter gigasporarum BEG34, Candidatus Glomeribacter gigasporarum str. BEG34, Candidatus Glomeribacter gigasporarum strain BEG34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.