STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pbpGPeptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Evidence 2b:Function of strongly homologous gene; Product type e:enzyme; Belongs to the peptidase S11 family. (388 aa)    
Predicted Functional Partners:
CCD28871.1
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase precursor; Evidence 2b:Function of strongly homologous gene; Product type e:enzyme.
     
 0.484
mrcA
Penicillin-binding protein 1A (PBP-1a) (PBP1a); Evidence 2a:Function of homologous gene experimentally demonstrated in an other organism; Product type e:enzyme.
     
 0.484
CCD28861.1
Membrane-bound lytic transglycosylase,catalytic precursor; Evidence 2a:Function of homologous gene experimentally demonstrated in an other organism; Product type e:enzyme.
   
  
 0.470
amiD
N-acetylmuramoyl-L-alanine amidase amiD precursor; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type e:enzyme.
     
 0.466
MrdA
Peptidoglycan glycosyltransferase (Penicillin-binding protein 2, PBP-2); Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily.
  
 
 0.423
FtsI
Peptidoglycan glycosyltransferase, FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum.
  
 
 0.403
Your Current Organism:
Glomeribacter gigasporarum
NCBI taxonomy Id: 1070319
Other names: C. Glomeribacter gigasporarum BEG34, Candidatus Glomeribacter gigasporarum BEG34, Candidatus Glomeribacter gigasporarum str. BEG34, Candidatus Glomeribacter gigasporarum strain BEG34
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.