STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCD29778.1Conserved hypothetical protein; Evidence 4:Homologs of previously reported genes of unknown function. (156 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolyzing) (Glutamine amidotransferase) (GMP synthetase); Catalyzes the synthesis of GMP from XMP.
    
 0.930
CCD30067.1
Sensor protein; Evidence 2b:Function of strongly homologous gene; Product type e:enzyme.
    
 0.885
CCD30218.1
Putative Histidine kinase, sensor protein (fragment); Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe:putative enzyme.
     
 0.835
CCD30230.1
Putative Histidine kinase; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe:putative enzyme.
    
 0.736
CCD29779.1
Putative osmotically-inducible protein Y; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt:putative transporter.
       0.608
fpr
ferredoxin--NADP+ reductase; Evidence 2a:Function of homologous gene experimentally demonstrated in an other organism; Product type e:enzyme.
       0.570
purB
Putative adenylosuccinate lyase (fragment); Evidence 2b:Function of strongly homologous gene; Product type e:enzyme.
   
 0.561
guaB
Inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPDH) (IMPD); Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 0.544
fnrP
Ferric nitrate regulator FnrP; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type r:regulator.
    
  0.525
kdsA
2-dehydro-3-deoxyphosphooctonate aldolase; Evidence 2a:Function of homologous gene experimentally demonstrated in an other organism; Product type e:enzyme; Belongs to the KdsA family.
  
 
 0.514
Your Current Organism:
Glomeribacter gigasporarum
NCBI taxonomy Id: 1070319
Other names: C. Glomeribacter gigasporarum BEG34, Candidatus Glomeribacter gigasporarum BEG34, Candidatus Glomeribacter gigasporarum str. BEG34, Candidatus Glomeribacter gigasporarum strain BEG34
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