STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chpSFragment of Type IV pilus protein PilS (part 2); Evidence 2b:Function of strongly homologous gene; Product type s:structure. (83 aa)    
Predicted Functional Partners:
chpB
Toxin of the ChpB-ChpS toxin-antitoxin system; Evidence 2a:Function of homologous gene experimentally demonstrated in an other organism; Product type f:factor.
  
 
 0.965
chpA
Toxin of the ChpA-ChpR toxin-antitoxin system,endoribonuclease; Evidence 2a:Function of homologous gene experimentally demonstrated in an other organism; Product type e:enzyme.
  
 
 0.725
pilT
Type IV B pilus protein pilT; Evidence 2a:Function of homologous gene experimentally demonstrated in an other organism; Product type s:structure.
       0.678
CCD29334.1
Type IV pilus protein PilV; Evidence 2b:Function of strongly homologous gene; Product type s:structure.
       0.678
G2JA06_9BURK
Fragment of IS110 family transposase; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe:putative enzyme.
   
   0.606
G2JBM1_9BURK
Putative sensor protein; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type prc:putative receptor.
   
   0.606
mazF
Transcriptional modulator of MazE/toxin, MazF; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pcp:putative cell process.
   
   0.606
yoeB
Addiction module toxin YoeB; Evidence 2a:Function of homologous gene experimentally demonstrated in an other organism; Product type f:factor.
      
 0.584
yefM
Antitoxin of the YoeB-YefM toxin-antitoxin system; Antitoxin component of a type II toxin-antitoxin (TA) system.
      
 0.583
pilM-3
Type IV pilus protein PilM; Evidence 2b:Function of strongly homologous gene; Product type s:structure.
       0.420
Your Current Organism:
Glomeribacter gigasporarum
NCBI taxonomy Id: 1070319
Other names: C. Glomeribacter gigasporarum BEG34, Candidatus Glomeribacter gigasporarum BEG34, Candidatus Glomeribacter gigasporarum str. BEG34, Candidatus Glomeribacter gigasporarum strain BEG34
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