STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dppA-6Periplasmic dipeptide transport protein precursor (Dipeptide-binding protein) (DBP); Evidence 2a:Function of homologous gene experimentally demonstrated in an other organism; Product type t:transporter. (525 aa)    
Predicted Functional Partners:
nadC
Nicotinate-nucleotide pyrophosphorylase (carboxylating) (QAPRTase); Evidence 2a:Function of homologous gene experimentally demonstrated in an other organism; Product type e:enzyme; Belongs to the NadC/ModD family.
       0.773
CCD29420.1
Putative transcriptional regulator; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr:putative regulator.
       0.664
dppC
Putative dipeptide transport system permease protein DppC-like (fragment); Evidence 2a:Function of homologous gene experimentally demonstrated in an other organism; Product type t:transporter.
  
  0.515
dppA-7
Periplasmic dipeptide transport protein precursor (Dipeptide-binding protein) (DBP); Evidence 2a:Function of homologous gene experimentally demonstrated in an other organism; Product type t:transporter.
  
  
 
0.438
nadA
Quinolinate synthetase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.
       0.426
CCD29119.1
Extracellular solute-binding protein family 5 precursor (putative dipeptide ABC transporter); Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type t:transporter.
  
  
 
0.406
Your Current Organism:
Glomeribacter gigasporarum
NCBI taxonomy Id: 1070319
Other names: C. Glomeribacter gigasporarum BEG34, Candidatus Glomeribacter gigasporarum BEG34, Candidatus Glomeribacter gigasporarum str. BEG34, Candidatus Glomeribacter gigasporarum strain BEG34
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