STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CdsAPhosphatidate cytidylyltransferase; Evidence 2a:Function of homologous gene experimentally demonstrated in an other organism; Product type e:enzyme; Belongs to the CDS family. (271 aa)    
Predicted Functional Partners:
dxr
Fragment of putative Salavaricin two-component response regulator; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.
 
  
 0.957
uppS
Undecaprenyl pyrophosphate synthase (UPP synthetase); Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
  
 0.869
uppS-2
Undecaprenyl pyrophosphate synthetase (UPP synthetase); Evidence 2a:Function of homologous gene experimentally demonstrated in an other organism; Product type e:enzyme.
 
  
 0.788
plsC
1-acyl-sn-glycerol-3-phosphate acyltransferase; Evidence 2a:Function of homologous gene experimentally demonstrated in an other organism; Product type e:enzyme.
    
 0.758
pssA
CDP-diacylglycerol-serine O-phosphatidyltransferase (Phosphatidylserine synthase); Evidence 2b:Function of strongly homologous gene; Product type e:enzyme; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.757
cls
Cardiolipin synthetase (Cardiolipin synthase) (CL synthase); Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
     
 0.734
tpiA
Triosephosphate isomerase (TIM) (Triose-phosphate isomerase); Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
 
  
 0.555
pyrH
Uridylate kinase (UK) (Uridine monophosphate kinase) (UMP kinase); Catalyzes the reversible phosphorylation of UMP to UDP.
 
  
 0.539
ribF
Riboflavin biosynthesis protein RibF; Evidence 2a:Function of homologous gene experimentally demonstrated in an other organism; Product type e:enzyme; Belongs to the ribF family.
 
   
 0.519
UbiA
Prenyltransferase, UbiA family; Evidence 2b:Function of strongly homologous gene; Product type e:enzyme; Belongs to the UbiA prenyltransferase family.
  
 
 0.492
Your Current Organism:
Glomeribacter gigasporarum
NCBI taxonomy Id: 1070319
Other names: C. Glomeribacter gigasporarum BEG34, Candidatus Glomeribacter gigasporarum BEG34, Candidatus Glomeribacter gigasporarum str. BEG34, Candidatus Glomeribacter gigasporarum strain BEG34
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