STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCD29944.1Putative phage protein (baseplate assembly J-like family protein); Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type h:extrachromosomal origin. (373 aa)    
Predicted Functional Partners:
CCD29938.1
Putative phage protein; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type h:extrachromosomal origin.
  
   0.895
CCD29943.1
Conserved hypothetical protein; Evidence 4:Homologs of previously reported genes of unknown function.
       0.794
G2JBY7_9BURK
Fragment of IS110 family (IS1111 group) transposase; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe:putative enzyme.
  
   0.786
CCD30253.1
Conserved phage-related protein; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe:putative enzyme.
   
   0.784
dinJ
DNA-damage-inducible protein (modular protein); Evidence 2a:Function of homologous gene experimentally demonstrated in an other organism; Product type f:factor.
       0.737
CCD29946.1
Putative uncharacterized protein (Plasmid stabilization system); Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pf:putative factor.
       0.737
CCD29947.1
Conserved hypothetical protein; Evidence 4:Homologs of previously reported genes of unknown function.
       0.698
CCD29941.1
Putative transcriptional regulator, XRE family; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr:putative regulator.
       0.549
CCD29942.1
Putative hypothetical protein; Evidence 5:No homology to any previously reported sequences.
       0.549
CCD28610.1
Putative bacteriophage protein (fragment); Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
   
   0.532
Your Current Organism:
Glomeribacter gigasporarum
NCBI taxonomy Id: 1070319
Other names: C. Glomeribacter gigasporarum BEG34, Candidatus Glomeribacter gigasporarum BEG34, Candidatus Glomeribacter gigasporarum str. BEG34, Candidatus Glomeribacter gigasporarum strain BEG34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.