STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCD29959.1Putative haemagglutinin-related autotransporter protein (YadA domain protein); Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt:putative transporter. (1018 aa)    
Predicted Functional Partners:
CCD30112.1
GumN family protein; Evidence 2b:Function of strongly homologous gene; Product type e:enzyme.
  
     0.525
gap
Glyceraldehyde 3-phosphate dehydrogenase; Evidence 2a:Function of homologous gene experimentally demonstrated in an other organism; Product type e:enzyme; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
       0.518
CCD28696.1
Conserved hypothetical protein; Evidence 4:Homologs of previously reported genes of unknown function.
  
     0.494
CCD29403.1
Exported hypothetical protein; Evidence 5:No homology to any previously reported sequences.
  
  
  0.456
CCD28745.1
Aminoglycoside phosphotransferase; Evidence 2a:Function of homologous gene experimentally demonstrated in an other organism; Product type e:enzyme.
  
     0.435
CCD29402.1
Putative conserved repeat domain; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pm:putative membrane component.
  
  
  0.435
Your Current Organism:
Glomeribacter gigasporarum
NCBI taxonomy Id: 1070319
Other names: C. Glomeribacter gigasporarum BEG34, Candidatus Glomeribacter gigasporarum BEG34, Candidatus Glomeribacter gigasporarum str. BEG34, Candidatus Glomeribacter gigasporarum strain BEG34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.