STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCD30026.1Conserved hypothetical protein; Evidence 4:Homologs of previously reported genes of unknown function. (385 aa)    
Predicted Functional Partners:
relE
Toxin of the RelE-RelB toxin-antitoxin system; Evidence 2a:Function of homologous gene experimentally demonstrated in an other organism; Product type h:extrachromosomal origin.
   
 
 0.722
CCD30125.1
Hypothetical protein; Evidence 6:Doubtful CDS.
   
 
 0.722
CCD30027.1
Family:IS4, Group: IS50 transposase (complete); Evidence 2a:Function of homologous gene experimentally demonstrated in an other organism; Product type e:enzyme.
       0.610
CCD28835.1
Putative phage-related DNA-binding protein; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type h:extrachromosomal origin.
 
  
0.453
CCD29924.1
Putative Transcriptional regulator; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr:putative regulator.
 
  
0.452
CCD30025.1
Putative DNA topoisomerase; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe:putative enzyme.
       0.426
Your Current Organism:
Glomeribacter gigasporarum
NCBI taxonomy Id: 1070319
Other names: C. Glomeribacter gigasporarum BEG34, Candidatus Glomeribacter gigasporarum BEG34, Candidatus Glomeribacter gigasporarum str. BEG34, Candidatus Glomeribacter gigasporarum strain BEG34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.