Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| rplM | rplS | CAGGBEG34_70005 | CAGGBEG34_220038 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 50S ribosomal subunit protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.997 |
| rplM | rplU | CAGGBEG34_70005 | CAGGBEG34_370004 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 50S ribosomal subunit protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.997 |
| rplM | rpmA | CAGGBEG34_70005 | CAGGBEG34_370005 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 50S ribosomal subunit protein L27; Evidence 2a:Function of homologous gene experimentally demonstrated in an other organism; Product type s:structure; Belongs to the bacterial ribosomal protein bL27 family. | 0.997 |
| rplM | rpmB | CAGGBEG34_70005 | CAGGBEG34_240066 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 50S ribosomal subunit protein L28; Evidence 2a:Function of homologous gene experimentally demonstrated in an other organism; Product type s:structure; Belongs to the bacterial ribosomal protein bL28 family. | 0.997 |
| rplM | rpmE | CAGGBEG34_70005 | CAGGBEG34_70006 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 50S ribosomal protein L31; Evidence 2a:Function of homologous gene experimentally demonstrated in an other organism; Product type s:structure. | 0.998 |
| rplM | rpmF | CAGGBEG34_70005 | CAGGBEG34_180151 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 50S ribosomal protein L32; Evidence 2b:Function of strongly homologous gene; Product type s:structure; Belongs to the bacterial ribosomal protein bL32 family. | 0.997 |
| rplM | rpsI | CAGGBEG34_70005 | CAGGBEG34_70004 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | tRNA-Ala; Evidence 2b:Function of strongly homologous gene; Product type n:RNA; codon recognized:GCG; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
| rplM | rpsO | CAGGBEG34_70005 | CAGGBEG34_200036 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 30S ribosomal subunit protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.998 |
| rplM | rpsP | CAGGBEG34_70005 | CAGGBEG34_220035 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 30S ribosomal subunit protein S16; Evidence 2a:Function of homologous gene experimentally demonstrated in an other organism; Product type s:structure; Belongs to the bacterial ribosomal protein bS16 family. | 0.998 |
| rplM | rpsT | CAGGBEG34_70005 | CAGGBEG34_220048 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 30S ribosomal subunit protein S20; Binds directly to 16S ribosomal RNA. | 0.997 |
| rplS | rplM | CAGGBEG34_220038 | CAGGBEG34_70005 | 50S ribosomal subunit protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.997 |
| rplS | rplU | CAGGBEG34_220038 | CAGGBEG34_370004 | 50S ribosomal subunit protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 50S ribosomal subunit protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.998 |
| rplS | rpmA | CAGGBEG34_220038 | CAGGBEG34_370005 | 50S ribosomal subunit protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 50S ribosomal subunit protein L27; Evidence 2a:Function of homologous gene experimentally demonstrated in an other organism; Product type s:structure; Belongs to the bacterial ribosomal protein bL27 family. | 0.997 |
| rplS | rpmB | CAGGBEG34_220038 | CAGGBEG34_240066 | 50S ribosomal subunit protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 50S ribosomal subunit protein L28; Evidence 2a:Function of homologous gene experimentally demonstrated in an other organism; Product type s:structure; Belongs to the bacterial ribosomal protein bL28 family. | 0.997 |
| rplS | rpmE | CAGGBEG34_220038 | CAGGBEG34_70006 | 50S ribosomal subunit protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 50S ribosomal protein L31; Evidence 2a:Function of homologous gene experimentally demonstrated in an other organism; Product type s:structure. | 0.997 |
| rplS | rpmF | CAGGBEG34_220038 | CAGGBEG34_180151 | 50S ribosomal subunit protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 50S ribosomal protein L32; Evidence 2b:Function of strongly homologous gene; Product type s:structure; Belongs to the bacterial ribosomal protein bL32 family. | 0.997 |
| rplS | rpsI | CAGGBEG34_220038 | CAGGBEG34_70004 | 50S ribosomal subunit protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | tRNA-Ala; Evidence 2b:Function of strongly homologous gene; Product type n:RNA; codon recognized:GCG; Belongs to the universal ribosomal protein uS9 family. | 0.997 |
| rplS | rpsO | CAGGBEG34_220038 | CAGGBEG34_200036 | 50S ribosomal subunit protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 30S ribosomal subunit protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.997 |
| rplS | rpsP | CAGGBEG34_220038 | CAGGBEG34_220035 | 50S ribosomal subunit protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 30S ribosomal subunit protein S16; Evidence 2a:Function of homologous gene experimentally demonstrated in an other organism; Product type s:structure; Belongs to the bacterial ribosomal protein bS16 family. | 0.999 |
| rplS | rpsT | CAGGBEG34_220038 | CAGGBEG34_220048 | 50S ribosomal subunit protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 30S ribosomal subunit protein S20; Binds directly to 16S ribosomal RNA. | 0.989 |
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