STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000966195_02107Unannotated protein. (310 aa)    
Predicted Functional Partners:
GCA_000966195_04483
Unannotated protein.
  
  
  0.659
GCA_000966195_03994
Unannotated protein.
 
0.607
GCA_000966195_02106
Unannotated protein.
       0.592
GCA_000966195_03321
Unannotated protein.
   
 
  0.575
GCA_000966195_03993
Unannotated protein.
 
0.534
GCA_000966195_03824
Unannotated protein.
 
0.527
GCA_000966195_01467
Unannotated protein.
 
0.525
GCA_000966195_00472
Unannotated protein.
    
 
 0.524
GCA_000966195_02346
Unannotated protein.
 
0.524
GCA_000966195_02618
Unannotated protein.
 
0.518
Your Current Organism:
Domibacillus robiginosus
NCBI taxonomy Id: 1071054
Other names: Bacillus sp. DSM 25058, D. robiginosus, DSM 25058, Domibacillus robiginosus Seiler et al. 2013, Jeotgalibacillus sp. WS 4628, LMG 26645, LMG:26645, strain WS 4628
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.