STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000966195_03934Unannotated protein. (262 aa)    
Predicted Functional Partners:
GCA_000966195_01649
Unannotated protein.
    
  0.930
GCA_000966195_04505
Unannotated protein.
  
  
 
0.809
GCA_000966195_01058
Unannotated protein.
  
  
 
0.802
GCA_000966195_01492
Unannotated protein.
  
 
 
0.794
GCA_000966195_03945
Unannotated protein.
 
  
 
0.792
GCA_000966195_01491
Unannotated protein.
 
 
 
0.788
GCA_000966195_02919
Unannotated protein.
  
  
 
0.781
GCA_000966195_01111
Unannotated protein.
 
  
 
0.779
GCA_000966195_01981
Unannotated protein.
 
   
 
0.777
GCA_000966195_00903
Unannotated protein.
  
  
 
0.761
Your Current Organism:
Domibacillus robiginosus
NCBI taxonomy Id: 1071054
Other names: Bacillus sp. DSM 25058, D. robiginosus, DSM 25058, Domibacillus robiginosus Seiler et al. 2013, Jeotgalibacillus sp. WS 4628, LMG 26645, LMG:26645, strain WS 4628
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.