STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NDAI0G04070Erf4 domain-containing protein. (283 aa)    
Predicted Functional Partners:
NDAI0H01540
SKIP_SNW domain-containing protein.
    
 0.976
NDAI0D04630
Uncharacterized protein.
    
 0.723
NDAI0A00740
Uncharacterized protein.
    
 0.694
NDAI0B00470
SANT domain-containing protein.
    
 0.694
NDAI0F01170
Uncharacterized protein.
    
 0.694
NDAI0E02480
Hist_deacetyl domain-containing protein.
   
 0.660
NDAI0G00650
Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.
   
 0.660
NDAI0A07830
Uncharacterized protein.
   
 0.637
NDAI0B00300
KRE9 domain-containing protein.
    
 0.589
NDAI0D04500
KRE9 domain-containing protein.
    
 0.589
Your Current Organism:
Naumovozyma dairenensis
NCBI taxonomy Id: 1071378
Other names: N. dairenensis CBS 421, Naumovozyma dairenensis CBS 421
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