TBLA0D04520 protein (Tetrapisispora blattae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TBLA0D04520

Uncharacterized protein. (203 aa)

Predicted Functional Partners:

TBLA0C05570

0.928

TBLA0B06230

0.927

TBLA0A09450

0.926

TBLA0E02710

0.926

TBLA0E04380

0.926

TBLA0D02740

0.925

TBLA0A06800

0.924

TBLA0D03800

0.923

TBLA0B03470

0.922

TBLA0C00450

0.895

Your Current Organism:

Tetrapisispora blattae

NCBI taxonomy Id: 1071380
Other names: T. blattae CBS 6284, Tetrapisispora blattae CBS 6284

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TBLA0A06800	TBLA0A09450	I2GWH0	I2GX78	Uncharacterized protein.	Uncharacterized protein.	0.999
TBLA0A06800	TBLA0B03470	I2GWH0	I2GYI6	Uncharacterized protein.	Uncharacterized protein.	0.999
TBLA0A06800	TBLA0B06230	I2GWH0	I2GZ96	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.999
TBLA0A06800	TBLA0C00450	I2GWH0	I2H0F9	Uncharacterized protein.	Uncharacterized protein.	0.884
TBLA0A06800	TBLA0C05570	I2GWH0	I2H1V3	Uncharacterized protein.	Uncharacterized protein.	0.997
TBLA0A06800	TBLA0D02740	I2GWH0	I2H325	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.997
TBLA0A06800	TBLA0D03800	I2GWH0	I2H3C7	Uncharacterized protein.	Uncharacterized protein.	0.998
TBLA0A06800	TBLA0D04520	I2GWH0	I2H3J6	Uncharacterized protein.	Uncharacterized protein.	0.924
TBLA0A06800	TBLA0E02710	I2GWH0	I2H4M5	Uncharacterized protein.	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.	0.999
TBLA0A06800	TBLA0E04380	I2GWH0	I2H540	Uncharacterized protein.	Uncharacterized protein.	0.990
TBLA0A09450	TBLA0A06800	I2GX78	I2GWH0	Uncharacterized protein.	Uncharacterized protein.	0.999
TBLA0A09450	TBLA0B03470	I2GX78	I2GYI6	Uncharacterized protein.	Uncharacterized protein.	0.999
TBLA0A09450	TBLA0B06230	I2GX78	I2GZ96	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.999
TBLA0A09450	TBLA0C00450	I2GX78	I2H0F9	Uncharacterized protein.	Uncharacterized protein.	0.993
TBLA0A09450	TBLA0C05570	I2GX78	I2H1V3	Uncharacterized protein.	Uncharacterized protein.	0.999
TBLA0A09450	TBLA0D02740	I2GX78	I2H325	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.999
TBLA0A09450	TBLA0D03800	I2GX78	I2H3C7	Uncharacterized protein.	Uncharacterized protein.	0.999
TBLA0A09450	TBLA0D04520	I2GX78	I2H3J6	Uncharacterized protein.	Uncharacterized protein.	0.926
TBLA0A09450	TBLA0E02710	I2GX78	I2H4M5	Uncharacterized protein.	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.	0.999
TBLA0A09450	TBLA0E04380	I2GX78	I2H540	Uncharacterized protein.	Uncharacterized protein.	0.999