STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFR99904.1Hypothetical protein. (176 aa)    
Predicted Functional Partners:
AFR99290.1
Hypothetical protein.
  
     0.750
AFS00474.1
Hypothetical protein.
  
     0.709
phoE
Putative phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family.
  
     0.631
AFR99139.1
Putative surface layer protein SlpB.
  
     0.603
AFR99619.1
Hypothetical protein.
  
     0.586
AFR99903.1
Uncharacterized protein conserved in bacteria.
       0.524
rpoE
RNA polymerase factor sigma-24.
  
     0.523
AFS01392.1
Hypothetical protein.
  
     0.522
AFS01161.1
Putative secreted protein.
  
     0.518
AFR99366.1
Hypothetical protein.
  
     0.507
Your Current Organism:
Lactobacillus buchneri CD034
NCBI taxonomy Id: 1071400
Other names: L. buchneri CD034, Lactobacillus buchneri str. CD034, Lactobacillus buchneri strain CD034
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.