STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFS00008.1Hypothetical protein. (70 aa)    
Predicted Functional Partners:
AFS00009.1
Putative tape measure protein.
       0.549
AFS00010.1
Putative minor structural protein.
       0.549
AFS00011.1
Hypothetical protein.
       0.549
AFS00012.1
Hypothetical protein.
       0.549
AFS00013.1
Hypothetical protein.
       0.549
AFS00014.1
Hypothetical protein.
       0.549
AFS00015.1
Phage Mu gp47 related protein.
       0.549
AFS00016.1
Hypothetical protein.
       0.531
AFS00017.1
Hypothetical protein.
       0.531
AFS00018.1
Hypothetical protein.
       0.531
Your Current Organism:
Lactobacillus buchneri CD034
NCBI taxonomy Id: 1071400
Other names: L. buchneri CD034, Lactobacillus buchneri str. CD034, Lactobacillus buchneri strain CD034
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.