STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFS00026.1Hypothetical protein. (120 aa)    
Predicted Functional Partners:
AFS00025.1
Hypothetical protein.
       0.773
AFS00330.1
Hypothetical protein; Small-conductance mechanosensitive channel.
  
     0.579
AFS00728.1
Hypothetical protein.
  
    0.567
AFS00027.1
Beta-lactamase family protein.
       0.547
AFR99845.1
Hypothetical protein.
  
     0.535
AFS00863.1
Putative transcriptional regulator, MerR family.
  
     0.477
AFS01221.1
Hypothetical protein.
  
     0.450
AFS00203.1
Hypothetical protein.
  
     0.433
ftsL
Protein required for the initiation of cell division; Essential cell division protein; Belongs to the FtsL family.
  
     0.416
AFS00114.1
Putative metallophosphoesterase.
  
     0.413
Your Current Organism:
Lactobacillus buchneri CD034
NCBI taxonomy Id: 1071400
Other names: L. buchneri CD034, Lactobacillus buchneri str. CD034, Lactobacillus buchneri strain CD034
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.